CV

Feel free to consult a PDF version of my CV.

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Publications

Peer-reviewed journal articles (7)

Articles de revues savantes (7)

[J7] G.M. Rurak, S. Simard, F. Charih, A. Van Geel, J. Stead, B. Woodside, J.R. Green, G. Coppola, N. Salmaso. Translatomic database of cortical astroglia across male and female mouse development reveals two distinct developmental phenotypes (2020). Cell Reports. (Submitted)
[J6] F. Charih, J. R. Green, K. K. Biggar. Machine Learning-Driven Identification of Novel Lysine Methylation Sites with MethylSight (2020). Star Protocols. [Paper]
[J5] K. K. Biggar*, F. Charih*, H. Liu, Y. B. Ruiz-Blanco, L. Stalker, A. Chopra, J. Connolly, K. Frensemier, M. Galka, Q. Fang, C. Wynder, W. L. Standford, J. R. Green, and S. S-C. Li. Proteome-wide Prediction of Lysine Methylation Reveals Novel Histone Marks and Outlines the Methyllysine Proteome (2020). Cell Reports 107896(32). (*Co-first authors) [Paper]
[J4] F. Charih, M. Bromwich, A. E. Mark, R. Lefrançois, and J. R. Green. Data-Driven Audiogram Classification for Mobile Audiometry (2020). Scientific Reports 3962(10). [Paper]
[J3] S. Sarvan, A. Yeung, F. Charih, A. Stintzi, and J.-F. Couture. Crystal structure of Campylobacter jejuni peroxide regulator (2018). BioMetals 3(32) 491-500. [Paper]
[J2] S. Sarvan, F. Charih, J. Butcher, J. S. Brunzelle, A. Stintzi, and J.-F. Couture. Crystal structure of Campylobacter jejuni peroxide regulator (2018). FEBS Letters 13(592) 2351-2360. [Paper]
[J1] S. Sarvan, F. Charih, M. Askoura, J. Butcher, J. S. Brunzelle, A. Stintzi, and J.-F. Couture. Functional insights into the interplay between DNA interaction and metal coordination in ferric uptake regulators (2018). Scientific Reports 1(8) 1-14. [Paper]

Conference proceedings (5)

Compte-rendus de conférences (5)

[C5] K. Dick, F. Charih, J. Woo, J. R. Green. Gas Prices of America: The Machine-Augmented Crowd-Sourcing Era. 17th Conference on Computer and Robot Vision, Ottawa, Canada May 2020. [Paper]
[C4] R. Selzler, A. Smith, F. Charih, A. Boyle, J. Holly, C. Bridgewater, M. Besemann, D. Curran, A. D. C. Chan, and J. R. Green. Exploratory Analysis of Ultra-Short-Term Heart Rate Variability Features in Virtual Rehabilitation Sessions. 2020 IEEE International Symposium on Medical Measurements and Applications (MeMeA), Bari, Italy June 2020. [Paper]
[C3] F. Charih, A. Steeves, M. Bromwich, A. E. Mark, R. Lefrançois, and J. R. Green. Applications of Machine Learning Methods in Retrospective Studies on Hearing. Proceedings of the 2018 IEEE Life Sciences Conference, Montréal, Canada October 2018. [Paper] [Slides]
[C2] F. Charih, M. Bromwich, R. Lefrançois, A. E. Mark, and J. R. Green. Mining Audiograms to Improve the Interpretability of Automated Audiometry Measurements. Proceedings of the 2018 IEEE International Symposium on Medical Measurements and Applications (MeMeA), Rome, Italy June 2018. [Paper] [Slides]
[C1] K. Dick, F. Charih, Y. Souley Dosso, L. Russell, and J. R. Green. Systematic Street View Sampling: High Quality Annotation of Power Infrastructure in Rural Ontario. Proceedings of the 2018 15th Conference on Computer and Robot Vision (CRV), Toronto, Canada May 2018. [Paper]

Web tools

Outils web

MethylSight (undergoing maintenance)
A web server that makes the MethylSight lysine methylation predictor available to biologists.
cuBIC website
The website of the Carleton University Biomedical Informatics Collaboratory.
StarDB
A database of translatomic data from astroglia (in collaboration with the Salmaso lab).